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  5. Adi_g117928

Adi_g117928


Description : not classified & original description: none


Gene families : OG0003815 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003815_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g117928
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AT4G25290 No alias DNA photolyases;DNA photolyases 0.03 OrthoFinder output from all 47 species
Als_g14682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42358.t1 Aspi01Gene42358 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g008093 No alias not classified & original description: CDS=112-2241 0.05 OrthoFinder output from all 47 species
Ceric.29G036100.1 Ceric.29G036100 not classified & original description: pacid=50624244... 0.03 OrthoFinder output from all 47 species
Dac_g23206 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01018563001 No alias Cryptochrome DASH, chloroplastic/mitochondrial OS=Oryza... 0.03 OrthoFinder output from all 47 species
LOC_Os09g36240.1 LOC_Os09g36240 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g09322 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g17461 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10226519g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10435690g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g44244 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g14887 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g09918 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0102.g019846 No alias not classified & original description: CDS=149-4825 0.06 OrthoFinder output from all 47 species
Zm00001e034806_P002 Zm00001e034806 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 473 707
IPR006050 DNA_photolyase_N 78 180
No external refs found!