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MA_132768g0010


Description : SYP1-group Qa-type SNARE component


Gene families : OG_01_0000372 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000372_tree ,
OG_02_0092710 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0073571 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_132768g0010
Cluster HCCA: Cluster_332

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00039700 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
AMTR_s00103p00119740 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
AT1G11250 SYP125, ATSYP125 syntaxin of plants 125 0.02 Archaeplastida
GSVIVT01023788001 No alias Syntaxin-112 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01035559001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.04 Archaeplastida
LOC_Os03g52650.1 No alias Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.02 Archaeplastida
Smo130326 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 Archaeplastida
Solyc01g109750.2.1 No alias SYP1-group Qa-type SNARE component 0.04 Archaeplastida
Zm00001e030621_P001 No alias SYP1-group Qa-type SNARE component 0.02 Archaeplastida
Zm00001e032875_P002 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e037387_P002 No alias SYP1-group Qa-type SNARE component 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 41 207
No external refs found!