1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g117153

Adi_g117153


Description : not classified & original description: none


Gene families : OG0007491 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007491_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g117153

Target Alias Description ECC score Gene Family Method Actions
Ala_g02670 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g03588 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05627 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0099.g043991 OTP84 not classified & original description: CDS=230-3472 0.03 OrthoFinder output from all 47 species
Cba_g13501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G004500.1 Ceric.02G004500 not classified & original description: pacid=50584632... 0.03 OrthoFinder output from all 47 species
Ceric.17G084700.1 Ceric.17G084700 not classified & original description: pacid=50618199... 0.03 OrthoFinder output from all 47 species
Dde_g03497 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g21687 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21256 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14230 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g10179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0234.g026528 No alias not classified & original description: CDS=213-3461 0.03 OrthoFinder output from all 47 species
Sam_g08396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07066 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP HCCA
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP HCCA
BP GO:0006144 purine nucleobase metabolic process IEP HCCA
BP GO:0006282 regulation of DNA repair IEP HCCA
BP GO:0006528 asparagine metabolic process IEP HCCA
BP GO:0006529 asparagine biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
BP GO:0009113 purine nucleobase biosynthetic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 699 746
IPR002885 Pentatricopeptide_repeat 505 547
IPR032867 DYW_dom 975 1054
IPR002885 Pentatricopeptide_repeat 201 228
IPR002885 Pentatricopeptide_repeat 577 602
IPR002885 Pentatricopeptide_repeat 804 830
IPR002885 Pentatricopeptide_repeat 478 498
IPR002885 Pentatricopeptide_repeat 302 332
IPR002885 Pentatricopeptide_repeat 403 422
No external refs found!