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  5. Ehy_g19364

Ehy_g19364 (EMB2776, LIS)


Aliases : EMB2776, LIS

Description : component *(PRPF4) of spliceosomal U4/U6 snRNP & original description: none


Gene families : OG0003984 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003984_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g19364

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g23935.1 EMB2776, LIS,... protein factor PRPF4 of U4/U6 small nuclear... 0.03 OrthoFinder output from all 47 species
MA_10434586g0010 EMB2776, LIS protein factor PRPF4 of U4/U6 small nuclear... 0.03 OrthoFinder output from all 47 species
Mp1g10730.1 EMB2776, LIS protein factor PRPF4 of U4/U6 small nuclear... 0.03 OrthoFinder output from all 47 species
Ore_g19224 EMB2776, LIS component *(PRPF4) of spliceosomal U4/U6 snRNP &... 0.02 OrthoFinder output from all 47 species
Ppi_g16601 EMB2776, LIS component *(PRPF4) of spliceosomal U4/U6 snRNP &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 463 497
IPR001680 WD40_repeat 376 413
IPR001680 WD40_repeat 335 372
IPR001680 WD40_repeat 424 455
IPR001680 WD40_repeat 306 330
IPR001680 WD40_repeat 545 582
IPR014906 PRP4-like 163 190
No external refs found!