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  5. Adi_g116117

Adi_g116117


Description : mRNA chaperone *(RLSB/BSF) & original description: none


Gene families : OG0002842 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002842_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g116117

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00066980 evm_27.TU.AmTr_v1... 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea 0.02 OrthoFinder output from all 47 species
Cba_g67855 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11303 No alias mRNA chaperone *(RLSB/BSF) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04128 No alias mRNA chaperone *(RLSB/BSF) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g02878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26693 No alias mRNA chaperone *(RLSB/BSF) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04958 No alias mRNA chaperone *(RLSB/BSF) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26161 No alias mRNA chaperone *(RLSB/BSF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15308 No alias mRNA chaperone *(RLSB/BSF) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008837 diaminopimelate epimerase activity IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0031179 peptide modification IEP HCCA
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
MF GO:0047661 amino-acid racemase activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!