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  5. Adi_g115825

Adi_g115825 (RGA2, GAI)


Aliases : RGA2, GAI

Description : GRAS-type transcription factor & original description: none


Gene families : OG0002153 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002153_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g115825

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00099410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
AMTR_s00156p00061400 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.02 OrthoFinder output from all 47 species
Adi_g055203 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g107971 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.05 OrthoFinder output from all 47 species
Adi_g129595 RGA2, GAI GRAS-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Aev_g17407 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.04 OrthoFinder output from all 47 species
Aspi01Gene64522.t1 Aspi01Gene64522 component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.03 OrthoFinder output from all 47 species
Dde_g41852 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.03 OrthoFinder output from all 47 species
Ore_g12299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28747 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.02 OrthoFinder output from all 47 species
Ore_g28748 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.02 OrthoFinder output from all 47 species
Spa_g07286 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 322 465
No external refs found!