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  5. Ehy_g19292

Ehy_g19292 (FCA)


Aliases : FCA

Description : transcription factor *(FCA/SSF) & original description: none


Gene families : OG0001208 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001208_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g19292
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Adi_g021978 FCA transcription factor *(FCA/SSF) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G023200.1 FCA, Ceric.04G023200 transcription factor *(FCA/SSF) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.14G007400.1 FCA, Ceric.14G007400 transcription factor *(FCA/SSF) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g03249 RBP-DR1, AtRBP-DR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_00863 FCA no description available(sp|b8bcz8|fca_orysi : 290.0) 0.04 OrthoFinder output from all 47 species
Gb_05124 FCA no description available(sp|b8bcz8|fca_orysi : 224.0) 0.04 OrthoFinder output from all 47 species
LOC_Os09g03610.1 FCA, LOC_Os09g03610 no description available(sp|q6k271|fca_orysj : 775.0) 0.02 OrthoFinder output from all 47 species
Lfl_g06188 FCA transcription factor *(FCA/SSF) & original description: none 0.03 OrthoFinder output from all 47 species
MA_114047g0010 FCA Flowering time control protein FCA OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_5779g0010 FCA Flowering time control protein FCA OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Ore_g19709 FCA transcription factor *(FCA/SSF) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g05004 FCA transcription factor *(FCA/SSF) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07218 No alias transcription factor *(FCA/SSF) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g058450.3.1 FCA, Solyc01g058450 Flowering time control protein FCA OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Tin_g10875 FCA transcription factor *(FCA/SSF) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e009433_P002 FCA, Zm00001e009433 no description available(sp|b8bcz8|fca_orysi : 625.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 109 173
IPR000504 RRM_dom 200 266
No external refs found!