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  5. Adi_g115238

Adi_g115238


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g115238

Target Alias Description ECC score Gene Family Method Actions
AT4G02075 PIT1 RING/FYVE/PHD zinc finger superfamily protein 0.03 OrthoFinder output from all 47 species
Aob_g43317 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00849 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028110001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
LOC_Os11g38800.1 LOC_Os11g38800 RING-v-class E3 ligase 0.01 OrthoFinder output from all 47 species
Ore_g02371 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g40789 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g010880.3.1 Solyc01g010880 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 4 49
IPR022143 DUF3675 56 166
No external refs found!