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  5. Adi_g114841

Adi_g114841 (AT PRP39-2, PRP39-2)


Aliases : AT PRP39-2, PRP39-2

Description : not classified & original description: none


Gene families : OG0002297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g114841

Target Alias Description ECC score Gene Family Method Actions
Adi_g059075 PRP39 pre-mRNA-processing protein *(PRP39) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40489 PRP39 pre-mRNA-processing protein *(PRP39) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021383001 AT PRP39-2, PRP39-2 No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01028423001 PRP39 No description available 0.03 OrthoFinder output from all 47 species
Lfl_g19659 PRP39 pre-mRNA-processing protein *(PRP39) & original description: none 0.03 OrthoFinder output from all 47 species
MA_6626g0010 PRP39 pre-mRNA-processing protein (PRP39) 0.03 OrthoFinder output from all 47 species
Mp6g00560.1 PRP39 pre-mRNA-processing protein (PRP39) 0.01 OrthoFinder output from all 47 species
Ppi_g29159 PRP39 pre-mRNA-processing protein *(PRP39) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!