GSVIVT01009003001


Description : 10.6.2 cell wall.degradation.mannan-xylose-arabinose-fucose Glycosyl hydrolase family protein


Gene families : OG_01_0000215 (Gene family) Phylogenetic Tree(s): OG0000215_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01009003001
Cluster HCCA cluster: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
AT5G49360 ATBXL1, BXL1 beta-xylosidase 1 0.03 Gene family
GSVIVT01017658001 No alias 10.6.2 cell... 0.04 Gene family
GSVIVT01017659001 No alias 10.6.2 cell... 0.04 Gene family
LOC_Os01g19220 Os01g0296700 10.6.2 cell... 0.03 Gene family
LOC_Os02g51620 Os02g0752200 10.6.2 cell... 0.04 Gene family
LOC_Os04g54810 Os04g0640700 10.6.2 cell... 0.04 Gene family
LOC_Os11g18730 Os11g0291450,... 10.6.2 cell... 0.02 Gene family
LOC_Os11g19160 Os11g0297300 10.6.2 cell... 0.02 Gene family
MA_10436568g0020 No alias 10.6.2 cell... 0.02 Gene family
MA_140124g0010 No alias 10.6.2 cell... 0.02 Gene family
MA_6160451g0010 No alias 10.6.2 cell... 0.02 Gene family
MA_99945g0010 No alias 10.6.2 cell... 0.02 Gene family
Smo419541 PACid_15410480 No description available 0.02 Gene family
Solyc01g079570.3.1 Solyc01g079570.3 10.6.2 cell... 0.04 Gene family
Solyc04g072850.3.1 Solyc04g072850.3 10.6.2 cell... 0.03 Gene family
Zm00001d004626 GRMZM5G829293 10.6.2 cell... 0.03 Gene family
Zm00001d009060 GRMZM2G111998 10.6.2 cell... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan
BP GO:0005975 carbohydrate metabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002772 Glyco_hydro_3_C 402 631
IPR026891 Fn3-like 1336 1402
IPR002772 Glyco_hydro_3_C 1069 1298
IPR001764 Glyco_hydro_3_N 736 1026
IPR001764 Glyco_hydro_3_N 107 359
No external refs found!