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  5. Ehy_g19104

Ehy_g19104


Description : not classified & original description: none


Gene families : OG0001540 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001540_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g19104

Target Alias Description ECC score Gene Family Method Actions
AT5G63860 UVR8 Regulator of chromosome condensation (RCC1) family protein 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020938.2 UVR8 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 175 233
IPR000408 Reg_chr_condens 24 66
IPR000408 Reg_chr_condens 285 336
IPR000408 Reg_chr_condens 357 403
IPR000408 Reg_chr_condens 122 172
IPR000408 Reg_chr_condens 69 118
No external refs found!