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  5. Ehy_g19066

Ehy_g19066


Description : not classified & original description: none


Gene families : OG0000978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000978_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g19066
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00089p00157190 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00089p00157880 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00700p00004930 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G48090 No alias calcium-dependent lipid-binding family protein 0.03 OrthoFinder output from all 47 species
Adi_g011982 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17458 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g19181 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g05070 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g32428 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene42698.t1 Aspi01Gene42698 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55587.t1 Aspi01Gene55587 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.21G079300.1 Ceric.21G079300 not classified & original description: pacid=50602615... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001343.3 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre17.g730650 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g12763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g26863 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013268001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01013270001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01017643001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_35998 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g08664 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10426328g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_119498g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_342412g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_36612g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_901094g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g07570.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g25798 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16274 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005700 No alias not classified & original description: CDS=17-12964 0.04 OrthoFinder output from all 47 species
Sam_g17487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g43046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g009350.2.1 Solyc09g009350 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g009370.4.1 Solyc09g009370 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR031642 VPS13_mid_RBG 585 809
IPR031646 VPS13_extend_chorein 140 385
IPR009291 Vps62 2242 2385
IPR009291 Vps62 2005 2147
IPR001849 PH_domain 854 946
IPR009543 VPS13_VAB 3295 3603
IPR026854 VPS13-like_N 2 114
No external refs found!