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  5. Adi_g112322

Adi_g112322 (ZFN1)


Aliases : ZFN1

Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g112322

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00074p00110430 ZFN2,... RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
Adi_g017416 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Adi_g108712 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
MA_137427g0010 ZFN1 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Pir_g15925 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 96 119
IPR000571 Znf_CCCH 415 440
IPR000571 Znf_CCCH 140 165
IPR000571 Znf_CCCH 369 394
IPR000571 Znf_CCCH 184 209
No external refs found!