MA_12926g0010


Description : Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 OS=Arabidopsis thaliana (sp|o82268|lsh3_arath : 206.0)


Gene families : OG_01_0000579 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000579_tree ,
OG_02_0000324 (LandPlants) Phylogenetic Tree(s): OG_02_0000324_tree ,
OG_03_0000239 (SeedPlants) Phylogenetic Tree(s): OG_03_0000239_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_12926g0010
Cluster HCCA: Cluster_486

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00052610 evm_27.TU.AmTr_v1... Protein G1-like2 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AT1G78815 LSH7 Protein of unknown function (DUF640) 0.03 Archaeplastida
AT3G04510 LSH2 Protein of unknown function (DUF640) 0.02 Archaeplastida
GSVIVT01014203001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 7... 0.02 Archaeplastida
GSVIVT01021215001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.03 Archaeplastida
GSVIVT01023521001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4... 0.05 Archaeplastida
LOC_Os02g07030.1 No alias Protein G1-like1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os02g41460.1 No alias Protein G1-like3 OS=Oryza sativa subsp. indica... 0.03 Archaeplastida
LOC_Os04g43580.2 No alias Protein G1-like3 OS=Oryza sativa subsp. indica... 0.02 Archaeplastida
Solyc02g069510.1.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5... 0.02 Archaeplastida
Solyc10g007310.1.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.02 Archaeplastida
Solyc10g008000.1.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.03 Archaeplastida
Zm00001e004570_P001 No alias Protein G1-like4 OS=Oryza sativa subsp. indica... 0.02 Archaeplastida
Zm00001e012687_P001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.02 Archaeplastida
Zm00001e031512_P001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5... 0.02 Archaeplastida
AMTR_s00067p00052610 evm_27.TU.AmTr_v1... Protein G1-like2 OS=Oryza sativa subsp. japonica 0.02 LandPlants
AT2G42610 LSH10 Protein of unknown function (DUF640) 0.02 LandPlants
AT3G04510 LSH2 Protein of unknown function (DUF640) 0.02 LandPlants
GSVIVT01021215001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.02 LandPlants
GSVIVT01023521001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4... 0.02 LandPlants
Solyc02g069510.1.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5... 0.02 LandPlants
Solyc10g008000.1.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.03 LandPlants
Zm00001e012687_P001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.02 LandPlants
Zm00001e028824_P001 No alias Protein G1-like8 OS=Oryza sativa subsp. indica... 0.01 LandPlants
GSVIVT01023521001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4... 0.02 SeedPlants
LOC_Os02g41460.1 No alias Protein G1-like3 OS=Oryza sativa subsp. indica... 0.01 SeedPlants
Solyc02g069510.1.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5... 0.02 SeedPlants
Solyc10g007310.1.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.01 SeedPlants
Zm00001e028824_P001 No alias Protein G1-like8 OS=Oryza sativa subsp. indica... 0.01 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006936 ALOG_dom 27 149
No external refs found!