Adi_g112037 (ATARFA1B, ARFA1B)

Aliases : ATARFA1B, ARFA1B

Description : ARF-GTPase *(ARF1) & original description: none

Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g112037

Target	Alias	Description	ECC score	Gene Family Method
AT1G10630	ATARFA1F, ARFA1F	ADP-ribosylation factor A1F	0.02	OrthoFinder output from all 47 species
AT2G47170	ARF1A1C	Ras-related small GTP-binding family protein	0.03	OrthoFinder output from all 47 species
AT3G03120	ATARFB1C, ARFB1C	ADP-ribosylation factor B1C	0.03	OrthoFinder output from all 47 species
AT3G62290	ARFA1E, ATARFA1E	ADP-ribosylation factor A1E	0.02	OrthoFinder output from all 47 species
Ala_g06715	ATARF1, ARF1,...	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g11192	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g07699	ATARFB1B, ARFB1B	ARF-GTPase *(ARFA) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g19871	ATARFB1B, ARFB1B	ARF-GTPase *(ARFA) & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g02408	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g49446	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.12G047200.1	ATARFA1B,...	ARF-GTPase *(ARF1) & original description:...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021127.129	ARFA1E, ATARFA1E	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.01	OrthoFinder output from all 47 species
Dac_g36401	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g05453	ATARFB1B, ARFB1B	ARF-GTPase *(ARFA) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01013765001	ARFA1E, ATARFA1E	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.04	OrthoFinder output from all 47 species
GSVIVT01017654001	ATARFA1F, ARFA1F	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.04	OrthoFinder output from all 47 species
LOC_Os03g59740.1	ATARFA1B,...	ARF-GTPase	0.05	OrthoFinder output from all 47 species
LOC_Os07g12200.1	ARF1A1C, LOC_Os07g12200	ARF-GTPase	0.02	OrthoFinder output from all 47 species
Len_g05534	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g05275	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g23069	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g31478	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Mp3g13920.1	ATARFA1F, ARFA1F	ARF-GTPase	0.02	OrthoFinder output from all 47 species
Mp4g04230.1	ATARFA1F, ARFA1F	ARF-GTPase	0.01	OrthoFinder output from all 47 species
Mp7g13050.1	ATARFA1F, ARFA1F	ARF-GTPase	0.05	OrthoFinder output from all 47 species
Nbi_g15523	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g15667	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c12_14940V3.1	ARFA1E,...	ADP-ribosylation factor A1E	0.01	OrthoFinder output from all 47 species
Pp3c4_20623V3.1	ARFA1E,...	ADP-ribosylation factor A1E	0.02	OrthoFinder output from all 47 species
Spa_g49718	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
CC	GO:0031011	Ino80 complex	IEP	HCCA
CC	GO:0070603	SWI/SNF superfamily-type complex	IEP	HCCA
CC	GO:0097346	INO80-type complex	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:1904949	ATPase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	44	179

External Links

No external refs found!

Adi_g112037 (ATARFA1B, ARFA1B)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation