1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g110923

Adi_g110923


Description : not classified & original description: none


Gene families : OG0000756 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000756_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g110923

Target Alias Description ECC score Gene Family Method Actions
AT1G30690 No alias Sec14p-like phosphatidylinositol transfer family protein 0.03 OrthoFinder output from all 47 species
AT1G72150 PATL1 PATELLIN 1 0.02 OrthoFinder output from all 47 species
Ceric.39G036600.1 Ceric.39G036600 not classified & original description: pacid=50583070... 0.02 OrthoFinder output from all 47 species
Ehy_g21795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g06280.1 No alias Patellin-6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Msp_g01183 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13387 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007915 No alias not classified & original description: CDS=438-2087 0.02 OrthoFinder output from all 47 species
Zm00001e026912_P001 Zm00001e026912 Patellin-6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e031502_P004 Zm00001e031502 Patellin-6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 234 390
IPR011074 CRAL/TRIO_N_dom 142 178
No external refs found!