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  5. Adi_g110750

Adi_g110750


Description : E3 ubiquitin ligase *(RMA/MUSE) & original description: none


Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g110750

Target Alias Description ECC score Gene Family Method Actions
AT4G03510 RMA1, ATRMA1 RING membrane-anchor 1 0.02 OrthoFinder output from all 47 species
Adi_g107271 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38085 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11588 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.02 OrthoFinder output from all 47 species
MA_132683g0010 No alias RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Ppi_g41698 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g006960.3.1 RMA3, ATRMA3,... RING-HC-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e002512_P002 Zm00001e002512 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e027279_P001 Zm00001e027279 RING-HC-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e031880_P001 Zm00001e031880 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 207 247
No external refs found!