Aliases : AGO1
Description : regulatory protein *(AGO7) of transacting siRNA pathway & original description: none
Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00008p00203090 | AGO4, OCP11,... | Chromatin organisation.DNA methylation.canonical... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g003675 | AGO1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g013023 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g061052 | AGO1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g061053 | AGO1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g086261 | AGO1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g113326 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.05 | OrthoFinder output from all 47 species | |
Aspi01Gene68579.t1 | AGO1, Aspi01Gene68579 | siRNA-binding factor *(AGO2) of non-canonical RdDM... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01026268001 | AGO2 | Chromatin organisation.DNA methylation.canonical... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g58490.1 | AGO1, LOC_Os02g58490 | RIS-Complex miRNA recruiting factor (AGO1) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g39640.1 | PNH, AGO10, ZLL,... | RIS-Complex miRNA recruiting factor (AGO1) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g51310.2 | AGO1, LOC_Os06g51310 | RIS-Complex miRNA recruiting factor (AGO1) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os07g09020.1 | AGO5, LOC_Os07g09020 | Protein argonaute 14 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
MA_161177g0010 | AGO7, ZIP | Protein argonaute 7 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g010970.3.1 | AGO7, ZIP, Solyc01g010970 | Protein argonaute 7 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
Solyc02g069270.2.1 | AGO2, Solyc02g069270 | siRNA-binding factor (AGO2) of non-canonical RdDM pathway | 0.02 | OrthoFinder output from all 47 species | |
Solyc09g082830.4.1 | PNH, AGO10, ZLL,... | RIS-Complex miRNA recruiting factor (AGO1) | 0.02 | OrthoFinder output from all 47 species | |
Spa_g30174 | AGO1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e007233_P001 | AGO1, Zm00001e007233 | RIS-Complex miRNA recruiting factor (AGO1) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e030606_P001 | PNH, AGO10, ZLL,... | RIS-Complex miRNA recruiting factor (AGO1) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e037347_P002 | PNH, AGO10, ZLL,... | RIS-Complex miRNA recruiting factor (AGO1) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003909 | DNA ligase activity | IEP | HCCA |
MF | GO:0003910 | DNA ligase (ATP) activity | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006310 | DNA recombination | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0050896 | response to stimulus | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
No external refs found! |