Aliases : ATCOL5, COL5
Description : floral promoter *(CONSTANS) & original description: none
Gene families : OG0001141 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001141_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Azfi_s0095.g043601 | COL2, ATCOL2 | floral promoter *(CONSTANS) & original description: CDS=1-1494 | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os06g44450.1 | ATCOL5, COL5,... | Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g15050.1 | ATCOL5, COL5,... | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e002319_P001 | ATCOL4, COL4,... | Transcription factor GHD7 OS=Oryza sativa subsp.... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e037873_P001 | ATCOL4, COL4,... | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e039922_P001 | COL3, ATCOL3,... | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
BP | GO:0006766 | vitamin metabolic process | IEP | HCCA |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | HCCA |
BP | GO:0006771 | riboflavin metabolic process | IEP | HCCA |
MF | GO:0008703 | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity | IEP | HCCA |
BP | GO:0009110 | vitamin biosynthetic process | IEP | HCCA |
BP | GO:0009231 | riboflavin biosynthetic process | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | HCCA |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | HCCA |
BP | GO:0042726 | flavin-containing compound metabolic process | IEP | HCCA |
BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | HCCA |
No external refs found! |