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  5. Adi_g109558

Adi_g109558 (SDF2, AtSDF2, ATSDL)


Aliases : SDF2, AtSDF2, ATSDL

Description : component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex & original description: none


Gene families : OG0002033 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002033_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g109558

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g34190.1 SDF2, AtSDF2,... component SDF2 of ERdj3B-BiP-SDF2 chaperone complex 0.02 OrthoFinder output from all 47 species
Ore_g05305 SDF2, AtSDF2, ATSDL component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &... 0.02 OrthoFinder output from all 47 species
Pir_g03289 SDF2, AtSDF2, ATSDL component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &... 0.03 OrthoFinder output from all 47 species
Solyc03g117020.4.1 SDF2, AtSDF2,... component SDF2 of ERdj3B-BiP-SDF2 chaperone complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
InterPro domains Description Start Stop
IPR016093 MIR_motif 17 142
No external refs found!