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  5. Adi_g109476

Adi_g109476


Description : not classified & original description: none


Gene families : OG0002132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002132_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g109476

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00180540 evm_27.TU.AmTr_v1... RNA processing.RNA decay.deadenylation-dependent... 0.02 OrthoFinder output from all 47 species
AT1G07705 No alias NOT2 / NOT3 / NOT5 family 0.03 OrthoFinder output from all 47 species
Adi_g057086 No alias component *(NOT2) of mRNA deadenylation CCR4-NOT complex... 0.04 OrthoFinder output from all 47 species
Ala_g06550 No alias component *(NOT2) of mRNA deadenylation CCR4-NOT complex... 0.03 OrthoFinder output from all 47 species
Aspi01Gene51728.t1 VIP2, AtVIP2,... component *(NOT2) of mRNA deadenylation CCR4-NOT complex... 0.04 OrthoFinder output from all 47 species
Dde_g01636 No alias component *(NOT2) of mRNA deadenylation CCR4-NOT complex... 0.03 OrthoFinder output from all 47 species
Lfl_g03249 No alias component *(NOT2) of mRNA deadenylation CCR4-NOT complex... 0.03 OrthoFinder output from all 47 species
MA_19243g0010 VIP2, AtVIP2 component NOT2 of mRNA deadenylation CCR4-NOT complex 0.02 OrthoFinder output from all 47 species
Ore_g44004 No alias component *(NOT2) of mRNA deadenylation CCR4-NOT complex... 0.02 OrthoFinder output from all 47 species
Pnu_g30590 VIP2, AtVIP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11802 No alias component *(NOT2) of mRNA deadenylation CCR4-NOT complex... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!