Ehy_g18615

Description : nucleoporin of nuclear pore complex *(NUP98) & original description: none

Gene families : OG0001205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001205_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ehy_g18615

Target	Alias	Description	ECC score	Gene Family Method
Als_g02615	NUP96, PRE, SAR3, MOS3	nucleoporin of nuclear pore complex *(NUP98) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene58868.t2	Aspi01Gene58868	nucleoporin of nuclear pore complex *(NUP98) & original...	0.03	OrthoFinder output from all 47 species
Cba_g09959	No alias	nucleoporin of nuclear pore complex *(NUP98) & original...	0.02	OrthoFinder output from all 47 species
Ceric.28G024900.1	Ceric.28G024900	nucleoporin of nuclear pore complex *(NUP98) & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01019716001	No alias	Protein translocation.nucleus.nucleocytoplasmic...	0.04	OrthoFinder output from all 47 species
Gb_07065	No alias	NUP98 nucleoporin of nuclear pore complex	0.02	OrthoFinder output from all 47 species
Len_g11078	No alias	nucleoporin of nuclear pore complex *(NUP98) & original...	0.03	OrthoFinder output from all 47 species
Pir_g12223	No alias	nucleoporin of nuclear pore complex *(NUP98) & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020546	No alias	nucleoporin of nuclear pore complex *(NUP98) & original...	0.03	OrthoFinder output from all 47 species
Smo139717	NUP96, PRE, SAR3, MOS3	Protein translocation.nucleus.nucleocytoplasmic...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005643	nuclear pore	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017056	structural constituent of nuclear pore	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003968	RNA-dependent RNA polymerase activity	IEP	HCCA
BP	GO:0016042	lipid catabolic process	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007230	Nup98_auto-Pept-S59_dom	827	971

External Links

No external refs found!