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Aliases : TIR1
Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) & original description: none
Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G12820 | AFB3 | auxin signaling F-box 3 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G26810 | AFB2 | auxin signaling F-box 2 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G49980 | AFB5 | auxin F-box protein 5 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g112626 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g112628 | AFB2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g06119 | TIR1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.05G011000.1 | COI1, Ceric.05G011000 | not classified & original description: pacid=50578181... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g04665 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g02828 | COI1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g18581 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01003183001 | TIR1 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009126001 | AFB5 | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01016368001 | COI1 | Phytohormones.jasmonic acid.perception and signal... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g03214 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
| MA_15842g0010 | TIR1 | component TIR1/AFB of auxin receptor complex. component... | 0.03 | OrthoFinder output from all 47 species | |
| MA_15842g0020 | TIR1 | Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_47869g0020 | No alias | F-box protein FBX14 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| MA_78902g0010 | AFB5 | component TIR1/AFB of auxin receptor complex | 0.02 | OrthoFinder output from all 47 species | |
| Mp2g26590.1 | COI1 | component COI of jasmonic acid receptor complex | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g14297 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g16353 | COI1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g01684 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g18805 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g27800 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0032.g010765 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0052.g014055 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g38823 | No alias | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g11454 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g10047 | AFB2 | substrate adaptor of SCF E3 ubiquiTin ligase *(TIR1/AFB)... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | HCCA |
| BP | GO:0006006 | glucose metabolic process | IEP | HCCA |
| BP | GO:0006354 | DNA-templated transcription elongation | IEP | HCCA |
| BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | HCCA |
| BP | GO:0006606 | protein import into nucleus | IEP | HCCA |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
| CC | GO:0008023 | transcription elongation factor complex | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | HCCA |
| BP | GO:0019318 | hexose metabolic process | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| BP | GO:0034504 | protein localization to nucleus | IEP | HCCA |
| MF | GO:0050661 | NADP binding | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| BP | GO:0051169 | nuclear transport | IEP | HCCA |
| BP | GO:0051170 | import into nucleus | IEP | HCCA |
| MF | GO:0061608 | nuclear import signal receptor activity | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| MF | GO:0140104 | molecular carrier activity | IEP | HCCA |
| MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR041101 | Transp_inhibit | 34 | 80 |
| No external refs found! |