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  5. Adi_g107878

Adi_g107878 (ATHAM3, HAM3, LOM3)


Aliases : ATHAM3, HAM3, LOM3

Description : GRAS-type transcription factor & original description: none


Gene families : OG0002830 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002830_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g107878

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00228020 ATHAM3, HAM3,... RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
Adi_g088552 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g28196 ATHAM3, HAM3, LOM3 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09791 ATHAM3, HAM3, LOM3 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g090950.4.1 ATHAM3, HAM3,... transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
Solyc08g078800.1.1 ATHAM3, HAM3,... transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
Zm00001e007302_P001 ATHAM3, HAM3,... transcription factor (GRAS) 0.01 OrthoFinder output from all 47 species
Zm00001e015355_P002 ATHAM3, HAM3,... transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006906 vesicle fusion IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0016050 vesicle organization IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0048280 vesicle fusion with Golgi apparatus IEP HCCA
BP GO:0048284 organelle fusion IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0061025 membrane fusion IEP HCCA
BP GO:0090174 organelle membrane fusion IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 5 375
No external refs found!