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  5. Adi_g107348

Adi_g107348 (UBP12)


Aliases : UBP12

Description : not classified & original description: none


Gene families : OG0005085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g107348

Target Alias Description ECC score Gene Family Method Actions
Ala_g06394 UBP12 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g57720 UBP12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29880 UBP12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene23681.t1 Aspi01Gene23681 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010362 UBP12 not classified & original description: CDS=350-7828 0.03 OrthoFinder output from all 47 species
Ceric.15G071100.1 UBP12, Ceric.15G071100 not classified & original description: pacid=50640759... 0.05 OrthoFinder output from all 47 species
Dcu_g23057 UBP12 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g18112 UBP12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_35991 UBP12 Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g11501 UBP12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10436921g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_17762g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_6934376g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_7843052g0010 UBP13 Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g43540 UBP12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g49066 UBP12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020740 UBP12 not classified & original description: CDS=294-7754 0.04 OrthoFinder output from all 47 species
Smo447032 UBP12 Protein degradation.peptidase families.cysteine-type... 0.05 OrthoFinder output from all 47 species
Tin_g13986 UBP12 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR021905 DUF3517 2104 2371
IPR001394 Peptidase_C19_UCH 1557 1921
No external refs found!