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  5. Adi_g107170

Adi_g107170


Description : component *(RPP2) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000215 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000215_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g107170
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AT2G27720 No alias 60S acidic ribosomal protein family 0.03 OrthoFinder output from all 47 species
Adi_g098496 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g04074 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g18224 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g18711 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cba_g28150 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020830.75 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 47 species
Cre02.g143050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Ehy_g16099 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Lfl_g15507 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Nbi_g21745 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Nbi_g34093 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ore_g06199 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c1_27060V3.1 Pp3c1_27060 60S acidic ribosomal protein family 0.02 OrthoFinder output from all 47 species
Ppi_g26787 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g50056 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g02585 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g17151 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g23353 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Sam_g38961 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g40093 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Smo139397 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Solyc11g067100.2.1 Solyc11g067100 component RPP2 of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006449 regulation of translational termination IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034250 positive regulation of amide metabolic process IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0045901 positive regulation of translational elongation IEP HCCA
BP GO:0045905 positive regulation of translational termination IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!