GSVIVT01008065001


Description : 27.3.22 RNA.regulation of transcription.HB,Homeobox transcription factor family Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.


Gene families : OG_01_0000092 (Gene family) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01008065001
Cluster HCCA cluster: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AT3G61890 HB-12, ATHB-12, ATHB12 homeobox 12 0.02 Gene family
AT4G40060 ATHB16, HB16, ATHB-16 homeobox protein 16 0.02 Gene family
LOC_Os02g49700 Os02g0729700 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
LOC_Os08g37580 Os08g0481400 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
LOC_Os09g21180 Os09g0379600 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Zm00001d021934 GRMZM2G104204 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001356 Homeobox_dom 71 124
IPR003106 Leu_zip_homeo 126 167
No external refs found!