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  5. Ehy_g18417

Ehy_g18417 (XBAT35)


Aliases : XBAT35

Description : E3 ubiquitin ligase *(XBAT3) & original description: none


Gene families : OG0001126 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001126_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g18417
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AT3G23280 XBAT35 XB3 ortholog 5 in Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g012787 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14150 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0006.g010404 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: CDS=1-1692 0.02 OrthoFinder output from all 47 species
Ceric.14G022000.1 XBAT34, Ceric.14G022000 E3 ubiquitin ligase *(XBAT3) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g17783 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g26490.1 XBAT35, LOC_Os07g26490 RING-HC-class E3 ligase 0.02 OrthoFinder output from all 47 species
Len_g04795 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25146 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33785 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g07864 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16771 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008875 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: CDS=669-2021 0.02 OrthoFinder output from all 47 species
Sam_g39906 No alias E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g090160.3.1 XBAT35, Solyc09g090160 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Spa_g26255 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 57 128
No external refs found!