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  5. Adi_g106357

Adi_g106357


Description : not classified & original description: none


Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g106357

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00265700 evm_27.TU.AmTr_v1... RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
AMTR_s00033p00116200 evm_27.TU.AmTr_v1... KH domain-containing protein HEN4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G64390 HEN4 RNA-binding KH domain-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g016415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g128615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09611 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Als_g19267 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g33155 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g04310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68976.t1 Aspi01Gene68976 regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Azfi_s0021.g015632 No alias not classified & original description: CDS=147-1991 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042794 No alias not classified & original description: CDS=151-1857 0.02 OrthoFinder output from all 47 species
Azfi_s0280.g062273 No alias not classified & original description: CDS=315-2570 0.02 OrthoFinder output from all 47 species
Cba_g07339 HEN4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g12024 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G007100.1 Ceric.14G007100 not classified & original description: pacid=50632910... 0.02 OrthoFinder output from all 47 species
Ceric.25G027100.1 Ceric.25G027100 not classified & original description: pacid=50594480... 0.03 OrthoFinder output from all 47 species
Ceric.32G028300.1 Ceric.32G028300 not classified & original description: pacid=50598029... 0.03 OrthoFinder output from all 47 species
Ceric.32G061200.1 Ceric.32G061200 not classified & original description: pacid=50597564... 0.03 OrthoFinder output from all 47 species
Dac_g09565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12387 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g24061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07829 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01011439001 No alias RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
GSVIVT01021523001 No alias KH domain-containing protein At4g18375 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01031037001 No alias KH domain-containing protein At4g18375 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01038571001 No alias RNA-binding KH domain-containing protein RCF3... 0.04 OrthoFinder output from all 47 species
Gb_31686 No alias RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Len_g07805 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04023 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430861g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_20325g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_3715g0020 No alias RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
MA_6622g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g10485 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g32267 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03216 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g04462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05810 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Ore_g06772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21684 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g00616 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13999 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Pnu_g14000 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Pnu_g32788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008079 No alias not classified & original description: CDS=527-2194 0.02 OrthoFinder output from all 47 species
Sam_g11931 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g034200.3.1 Solyc03g034200 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Spa_g05211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53383 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g02804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g36753 PEP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001825_P001 Zm00001e001825 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e004486_P005 Zm00001e004486 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e012623_P002 Zm00001e012623 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Zm00001e026127_P004 Zm00001e026127 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Zm00001e030716_P002 Zm00001e030716 RNA-binding KH domain-containing protein RCF3... 0.04 OrthoFinder output from all 47 species
Zm00001e037033_P001 Zm00001e037033 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 91 117
IPR004088 KH_dom_type_1 2 51
No external refs found!