Cre01.g030850


Description : 29.5.11.20 protein.degradation.ubiquitin.proteasom Encodes alpha5 subunit of 20S proteosome complex involved in protein degradation. proteasome alpha subunit D2 (PAD2)


Gene families : OG_01_0003722 (Gene family) Phylogenetic Tree(s): OG0003722_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cre01.g030850
Cluster HCCA cluster: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT3G51260 PAD1 20S proteasome alpha subunit PAD1 0.22 Gene family
AT5G66140 PAD2 proteasome alpha subunit D2 0.02 Gene family
Cpa|evm.model.tig00020830.84 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.12 Gene family
GSVIVT01018748001 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.02 Gene family
GSVIVT01024037001 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.06 Gene family
LOC_Os08g43540 Os08g0548900 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.03 Gene family
LOC_Os09g36710 Os09g0538200 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.02 Gene family
MA_10436167g0010 No alias 29.5 protein.degradation 20S proteosomal alpha subunits.... 0.06 Gene family
Solyc01g111450.3.1 Solyc01g111450.3 29.5 protein.degradation Encodes alpha5 subunit of 20S... 0.13 Gene family
Zm00001d006235 GRMZM2G042604 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.05 Gene family
Zm00001d022629 GRMZM2G138128 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA InterProScan
CC GO:0005839 proteasome core complex IEA InterProScan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000426 Proteasome_asu_N 5 27
IPR001353 Proteasome_sua/b 28 209
No external refs found!