GSVIVT01007785001


Description : 34.22 transport.cyclic nucleotide or calcium regulated channels member of Cyclic nucleotide gated channel family cyclic nucleotide-gated channel 16 (CNGC16)


Gene families : OG_01_0000081 (Gene family) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01007785001
Cluster HCCA cluster: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AT2G28260 CNGC15, ATCNGC15 cyclic nucleotide-gated channel 15 0.02 Gene family
AT5G14870 CNGC18, ATCNGC18 cyclic nucleotide-gated channel 18 0.02 Gene family
LOC_Os03g44440 Os03g0646300 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
LOC_Os12g28260 Os12g0468500 34.22 transport.cyclic nucleotide or calcium regulated... 0.04 Gene family
Solyc02g088560.3.1 Solyc02g088560.3 No description available 0.02 Gene family
Solyc03g116850.3.1 Solyc03g116850.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Solyc08g069140.3.1 Solyc08g069140.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Zm00001d007925 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Zm00001d013688 GRMZM2G077828 34.22 transport.cyclic nucleotide or calcium regulated... 0.05 Gene family
Zm00001d053403 GRMZM2G066269 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan
BP GO:0006811 ion transport IEA InterProScan
CC GO:0016020 membrane IEA InterProScan
BP GO:0055085 transmembrane transport IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 452 539
IPR005821 Ion_trans_dom 30 352
No external refs found!