GSVIVT01007715001


Description : 27.3.22 RNA.regulation of transcription.HB,Homeobox transcription factor family homeodomain transcription factor KNAT6, belonging to class I of KN transcription factor family (which also includes KNAT1 and KNAT2). Expression is increased in as and bop1 leaf mutants. KNOTTED1-like homeobox gene 6 (KNAT6)


Gene families : OG_01_0000241 (Gene family) Phylogenetic Tree(s): OG0000241_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01007715001
Cluster HCCA cluster: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AT1G70510 KNAT2, ATK1 KNOTTED-like from Arabidopsis thaliana 2 0.03 Gene family
AT4G08150 BP, BP1, KNAT1 KNOTTED-like from Arabidopsis thaliana 0.03 Gene family
GSVIVT01004811001 No alias No description available 0.04 Gene family
GSVIVT01009273001 No alias No description available 0.02 Gene family
GSVIVT01013790001 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
GSVIVT01031241001 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
LOC_Os01g19694 Os01g0302500 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
LOC_Os03g51690 Os03g0727000 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
MA_10428446g0010 No alias No description available 0.02 Gene family
MA_3582g0010 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.05 Gene family
Solyc01g100510.3.1 Solyc01g100510.3 No description available 0.04 Gene family
Solyc02g081120.3.1 Solyc02g081120.3 No description available 0.03 Gene family
Solyc05g005090.3.1 Solyc05g005090.3 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.08 Gene family
Solyc12g010410.2.1 Solyc12g010410.2 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Zm00001d018742 GRMZM2G028041 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Zm00001d033404 GRMZM2G061101 No description available 0.02 Gene family
Zm00001d033861 GRMZM2G000743 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.05 Gene family
Zm00001d034212 GRMZM2G135447 No description available 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR008422 Homeobox_KN_domain 256 295
IPR005541 KNOX2 132 178
IPR005539 ELK_dom 216 237
IPR005540 KNOX1 79 120
No external refs found!