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  5. AMTR_s00179p00030770

AMTR_s00179p00030770 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00179.4

Description : Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase


Gene families : OG_01_0017588 (Archaeplastida) Phylogenetic Tree(s): OG_01_0017588_tree ,
OG_02_0000281 (LandPlants) Phylogenetic Tree(s): OG_02_0000281_tree ,
OG_03_0000124 (SeedPlants) Phylogenetic Tree(s): OG_03_0000124_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00179p00030770
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00060510 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.05 LandPlants
AMTR_s00154p00060510 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.05 SeedPlants
AT4G18180 No alias Pectin lyase-like superfamily protein 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 5 161
No external refs found!