- Home
- Species
- Actinostachys digitata
- Sequence
- Adi_g103429
Adi_g103429
Description : not classified & original description: none
Expression Profile
Attention: This gene has low abundance.
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
| Type | Description | Actions |
| Neighborhood | HRR: Adi_g103429 | |
| Cluster | HCCA: Cluster_295 | |
Functional Annotation
| Type | GO Term | Name | Evidence | Source |
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | HCCA |
| MF | GO:0004612 | phosphoenolpyruvate carboxykinase (ATP) activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | HCCA |
| BP | GO:0006006 | glucose metabolic process | IEP | HCCA |
| BP | GO:0006094 | gluconeogenesis | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009143 | nucleoside triphosphate catabolic process | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| BP | GO:0019318 | hexose metabolic process | IEP | HCCA |
| BP | GO:0019319 | hexose biosynthetic process | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | OG0000661_tree details <td class="col-xs-2"><a href="/go/view/17750" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, carried out by individual cells." [GOC:mah]">GO:0034645</a></td> <td class="col-xs-6">cellular macromolecule biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/17760" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the breakdown of nucleobases, nucleosides, nucleotides and nucleic acids." [GOC:mah]">GO:0034655</a></td> <td class="col-xs-6">nucleobase-containing compound catabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/20906" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide." [GOC:dph, GOC:jl]">GO:0043043</a></td> <td class="col-xs-6">peptide biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/21060" data-toggle="tooltip" data-placement="top" title=""Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane." [GOC:go_curators]">GO:0043226</a></td> <td class="col-xs-6">organelle</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/21062" data-toggle="tooltip" data-placement="top" title=""Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane. Includes ribosomes, the cytoskeleton and chromosomes." [GOC:go_curators]">GO:0043228</a></td> <td class="col-xs-6">non-membrane-bounded organelle</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/21063" data-toggle="tooltip" data-placement="top" title=""Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane." [GOC:go_curators]">GO:0043229</a></td> <td class="col-xs-6">intracellular organelle</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/21066" data-toggle="tooltip" data-placement="top" title=""Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes, the cytoskeleton and chromosomes." [GOC:go_curators]">GO:0043232</a></td> <td class="col-xs-6">intracellular non-membrane-bounded organelle</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/21398" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group, as carried out by individual cells." [GOC:curators]">GO:0043603</a></td> <td class="col-xs-6">amide metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/21399" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group." [GOC:curators]">GO:0043604</a></td> <td class="col-xs-6">amide biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/21981" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism." [GOC:go_curators, http://www.metacyc.org]">GO:0044238</a></td> <td class="col-xs-6">primary metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/21988" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells." [GOC:jl]">GO:0044249</a></td> <td class="col-xs-6">cellular biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/21994" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells." [GOC:mah]">GO:0044260</a></td> <td class="col-xs-6">cellular macromolecule metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/21999" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the breakdown of organic and inorganic nitrogenous compounds." [GOC:jl, ISBN:0198506732]">GO:0044270</a></td> <td class="col-xs-6">cellular nitrogen compound catabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/22000" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of organic and inorganic nitrogenous compounds." [GOC:jl, ISBN:0198506732]">GO:0044271</a></td> <td class="col-xs-6">cellular nitrogen compound biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/22007" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving small molecules, any low molecular weight, monomeric, non-encoded molecule." [GOC:curators, GOC:pde, GOC:vw]">GO:0044281</a></td> <td class="col-xs-6">small molecule metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/23738" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of monosaccharides, polyhydric alcohols containing either an aldehyde or a keto group and between three to ten or more carbon atoms." [ISBN:0198506732]">GO:0046364</a></td> <td class="col-xs-6">monosaccharide biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/23804" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the breakdown of organophosphates, any phosphate-containing organic compound." [GOC:ai]">GO:0046434</a></td> <td class="col-xs-6">organophosphate catabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/24056" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the breakdown of heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings)." [GOC:ai]">GO:0046700</a></td> <td class="col-xs-6">heterocycle catabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/24741" data-toggle="tooltip" data-placement="top" title=""Catalysis of the reaction: a nucleoside triphosphate + H2O = a nucleotide + H+ + diphosphate." [EC:3.6.1.9]">GO:0047429</a></td> <td class="col-xs-6">nucleoside triphosphate diphosphatase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/32691" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving an organic substance, any molecular entity containing carbon." [GOC:mah]">GO:0071704</a></td> <td class="col-xs-6">organic substance metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/40741" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the breakdown of a nucleoside phosphate." [GOC:TermGenie]">GO:1901292</a></td> <td class="col-xs-6">nucleoside phosphate catabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/40808" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the breakdown of organic cyclic compound." [GOC:TermGenie]">GO:1901361</a></td> <td class="col-xs-6">organic cyclic compound catabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/41008" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of organonitrogen compound." [GOC:pr, GOC:TermGenie]">GO:1901566</a></td> <td class="col-xs-6">organonitrogen compound biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/41018" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of an organic substance, any molecular entity containing carbon." [GOC:pr, GOC:TermGenie]">GO:1901576</a></td> <td class="col-xs-6">organic substance biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> </tbody> </table> </div> </div> <div class="tab-pane fade" id="tab3default"> <div class="panel-body"> <p>No InterPro domains available for this sequence</p> </div> </div> </div> </div> </div> <div class="row"> <div class="col-lg-12 col-md-12 col-sm-12"> <div class="panel panel-default"> <div class="panel-heading" id="links">External Links</div> <div class="table-responsive"> <table class="table table-striped table-separated"> <tbody> <tr> <td><em>No external refs found!</em></td> </td> </tr> </tbody> </table> </div> </div> </div> </div> <div class="modal" id="profileModal" tabindex="-1" role="dialog" aria-labelledby="profileModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> </div> </div> </div> <footer class="footer" id="footer"> <div class="container"> <div class="row"> <div class="col-xs-2"><strong class="text-muted"><a href="/features" class="text-muted">CoNekT</a></strong></div> <div class="col-xs-2"><a href="/about" class="text-muted">About</a></div> <div class="col-xs-2"><a href="/contact" class="text-muted">Contact</a></div> <div class="col-xs-2"><a href="/disclaimer" class="text-muted">Disclaimer</a></div> <div class="col-xs-2"><a href="/privacy" class="text-muted">Privacy policy</a></div> </div> </div> </footer> <div class="modal" id="helpModal" tabindex="-1" role="dialog" aria-labelledby="helpModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> <div class="modal" id="loaderModal" tabindex="-1" role="dialog" aria-labelledby="loaderModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> <div class="modal-body"> <div id="leafy_loader"></div> <p class="text-center text-muted" id="leafy_loader_text">Loading ... please wait ... </p> <p class="text-center" id="leafy_loader_close_btn" style="display:none"><button type="button" class="btn btn-primary" data-dismiss="modal" style>Close</button></p> </div> </div> </div> </div> <script src="/static/js/jquery.min.js"></script> <script src="/static/js/bootstrap.min.js"></script> <script src="/static/js/stupidtable.min.js"></script> <script src="/static/js/TweenMax.min.js"></script> <script src="/static/js/jquery.qtip.min.js"></script> <script src="/static/js/planet_loader.js"></script> <script>
function init_qtip() {
$('.qtip_tooltip').each(function() {
$(this).qtip({
content: {
text: function(event, api) {
$.ajax({
url: api.elements.target.attr('qtip_href')
})
.then(function(content) {
// Set the tooltip content upon successful retrieval
api.set('content.text', content);
}, function(xhr, status, error) {
// Upon failure... set the tooltip content to error
api.set('content.text', status + ': ' + error);
});
return 'Loading...'; // Set some initial text
}
},
show: {
effect: function() {
$(this).fadeTo(500, 1);
}
},
hide: {
effect: function() {
$(this).fadeTo(500, 0);
}
},
position: {
viewport: $(window)
},
style: 'qtip-bootstrap'
});
});
}
$(function () {
init_qtip();
$("#leafy_loader").html(get_loader_svg('loader_leafy'));
init_planet_loader('loader_leafy');
$('[data-toggle="popover"]').popover({container: 'body'});
$('a[data-target=#helpModal], abbr[data-target=#helpModal]').click(function(ev) {
ev.preventDefault();
var target = $(this).attr("href");
// load the url and show modal on success
$("#helpModal .modal-content").load(target, function() {
$("#helpModal").modal("show");
});
});
});
</script> <script src="/static/js/planet_pagination.js"></script> <script src="/static/js/planet_ajax_table.js"></script> <script type="text/javascript">
var csrf_token = "IjBlYjVmNDlhNjVkMzU0N2M5ZDQ1YjIyZjIwNGI0NjM5MjMzNjUzMWEi.Ghzz8A.ldatsTL-3BdCQal33HDtUyd-g_U";
$.ajaxSetup({
beforeSend: function(xhr, settings) {
if (!/^(GET|HEAD|OPTIONS|TRACE)$/i.test(settings.type) && !this.crossDomain) {
xhr.setRequestHeader("X-CSRFToken", csrf_token);
}
}
});
</script> <script src="/static/js/Chart.min.js"></script> <script src="/static/js/hammer.min.js"></script> <script src="/static/js/chartjs-plugin-zoom.min.js"></script> <script>
$(function () {
$("#go_table").stupidtable();
$("#predicted_go_table").stupidtable();
$("#interpro_table").stupidtable();
$("#ecc_hits_table").stupidtable();
$("#coexpression_table").stupidtable();
$('[data-toggle="tooltip"]').tooltip();
$('a[data-target=#profileModal]').click(function(ev) {
ev.preventDefault();
var target = $(this).attr("href");
// load the url and show modal on success
$("#profileModal .modal-content").load(target, function() {
$("#profileModal").modal("show");
});
});
$("#go_toggle").click(function(ev) {
ev.preventDefault();
$(".parent_term").toggle();
});
$("#navbar-side a").on('click', function(event) {
// Make sure this.hash has a value before overriding default behavior
if (this.hash !== "") {
// Prevent default anchor click behavior
event.preventDefault();
// Store hash
var hash = this.hash;
// Using jQuery's animate() method to add smooth page scroll
// The optional number (800) specifies the number of milliseconds it takes to scroll to the specified area
$('html, body').animate({
scrollTop: $(hash).offset().top - 55
}, 800, function(){
// Add hash (#) to URL when done scrolling (default click behavior)
window.location.hash = hash;
});
} // End if
});
})
$( document ).ready(function() {
$.getJSON( "/profile/json/plot/2332343", function( data ) {
var ctx = document.getElementById("expression-profile").getContext("2d");
data['options']['responsive'] = true;
data['options']['maintainAspectRatio'] = false;
data['options']['tooltips'] = {
enabled: true,
mode: 'label',
itemSort: function(a, b, data) {
conversion = {'Minimum': 0, 'Mean - Stdev':0, 'Mean': 1, 'Maximum': 2, 'Mean + Stdev': 2}
if (conversion[data.datasets[a.datasetIndex].label] > conversion[data.datasets[b.datasetIndex].label]) {
return -1
} else if (conversion[data.datasets[a.datasetIndex].label] < conversion[data.datasets[b.datasetIndex].label]) {
return 1
} else {
return 0
}
},
callbacks: {
afterTitle: function(tooltipItems, data) {
if (data.counts[tooltipItems[0].index] == null) {
return null;
} else {
if (data.counts[tooltipItems[0].index] == 1) {
return '(1 sample)';
} else {
return '(' + data.counts[tooltipItems[0].index] + ' samples)';
}
}
},
label: function(tooltipItems, data) {
return data.datasets[tooltipItems.datasetIndex].label + ': ' + tooltipItems.yLabel.toFixed(2);
}
}
}
var myChart = new Chart(ctx, data);
if (myChart.options.zoom.enabled) {
$("#enable_zoom").addClass("btn-success");
$("#enable_zoom").removeClass("btn-danger");
$("#enable_zoom").removeClass("btn-default");
} else {
$("#enable_zoom").addClass("btn-danger");
$("#enable_zoom").removeClass("btn-success");
$("#enable_zoom").removeClass("btn-default");
}
$("#enable_zoom").click( function(ev) {
ev.preventDefault();
myChart.options.zoom.enabled = ! myChart.options.zoom.enabled;
if (myChart.options.zoom.enabled) {
$(this).addClass("btn-success");
$(this).removeClass("btn-danger");
$(this).removeClass("btn-default");
} else {
$(this).addClass("btn-danger");
$(this).removeClass("btn-success");
$(this).removeClass("btn-default");
}
});
if (myChart.options.pan.enabled) {
$("#enable_pan").addClass("btn-success");
$("#enable_pan").removeClass("btn-danger");
$("#enable_pan").removeClass("btn-default");
} else {
$("#enable_pan").addClass("btn-danger");
$("#enable_pan").removeClass("btn-success");
$("#enable_pan").removeClass("btn-default");
}
$("#enable_pan").click( function(ev) {
ev.preventDefault();
myChart.options.pan.enabled = ! myChart.options.pan.enabled;
if (myChart.options.pan.enabled) {
$(this).addClass("btn-success");
$(this).removeClass("btn-danger");
$(this).removeClass("btn-default");
} else {
$(this).addClass("btn-danger");
$(this).removeClass("btn-success");
$(this).removeClass("btn-default");
}
});
});
});
</script> </body> </html>
