Cre01.g029450


Description : 27.3.62 RNA.regulation of transcription.Nucleosome/chromatin assembly factor group encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SSRP1. Along with STP16 binds to the promoter of FLC.


Gene families : OG_01_0001457 (Gene family) Phylogenetic Tree(s): OG0001457_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cre01.g029450
Cluster HCCA cluster: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT3G28730 ATHMG, HMG, SSRP1, NFD high mobility group 0.02 Gene family
Cpa|evm.model.tig00000076.93 No alias No description available 0.02 Gene family
GSVIVT01011349001 No alias No description available 0.01 Gene family
MA_5982g0010 No alias No description available 0.01 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR035417 POB3_N 7 91
IPR024954 SSRP1_dom 109 176
IPR009071 HMG_box_dom 602 670
IPR013719 DUF1747 358 450
No external refs found!