GSVIVT01007582001


Description : 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases Pectate lyase family protein


Gene families : OG_01_0000238 (Gene family) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01007582001
Cluster HCCA cluster: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AT3G07010 No alias Pectin lyase-like superfamily protein 0.03 Gene family
AT5G04310 No alias Pectin lyase-like superfamily protein 0.03 Gene family
AT5G48900 No alias Pectin lyase-like superfamily protein 0.03 Gene family
GSVIVT01028548001 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
MA_10437227g0020 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.04 Gene family
MA_203992g0010 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
MA_97947g0010 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
Solyc02g093580.3.1 Solyc02g093580.3 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Solyc03g111690.3.1 Solyc03g111690.3 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
Solyc11g008140.2.1 Solyc11g008140.2 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002022 Pec_lyase 137 320
No external refs found!