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  5. Ehy_g17946

Ehy_g17946


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0000970 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000970_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g17946

Target Alias Description ECC score Gene Family Method Actions
Aev_g12375 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19343 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0203.g057665 No alias not classified & original description: CDS=1-333 0.03 OrthoFinder output from all 47 species
GSVIVT01032781001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.03 OrthoFinder output from all 47 species
MA_10430713g0010 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Ore_g27310 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12892 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29275 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo440669 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.05 OrthoFinder output from all 47 species
Solyc06g051120.4.1 Solyc06g051120 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 54 139
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No external refs found!