AMTR_s00177p00063110 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00177.32

Description : Solute transport.channels.VIC superfamily.cyclic nucleotide-gated cation channel (CNGC-type)


Gene families : OG_01_0000137 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000137_tree ,
OG_02_0001872 (LandPlants) Phylogenetic Tree(s): OG_02_0001872_tree ,
OG_03_0005176 (SeedPlants) Phylogenetic Tree(s): OG_03_0005176_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00177p00063110
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01015970001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.04 Archaeplastida
GSVIVT01025208001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.03 Archaeplastida
GSVIVT01029404001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.02 Archaeplastida
LOC_Os12g28260.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Archaeplastida
MA_167620g0010 No alias cyclic nucleotide-gated cation channel (CNGC).... 0.05 Archaeplastida
Mp3g14660.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
Smo84488 No alias Solute transport.channels.VIC superfamily.cyclic... 0.05 Archaeplastida
Smo89324 No alias Solute transport.channels.VIC superfamily.cyclic... 0.02 Archaeplastida
MA_167620g0010 No alias cyclic nucleotide-gated cation channel (CNGC).... 0.04 LandPlants
Mp3g14660.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 LandPlants
Smo84488 No alias Solute transport.channels.VIC superfamily.cyclic... 0.05 LandPlants
MA_167620g0010 No alias cyclic nucleotide-gated cation channel (CNGC).... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 96 188
No external refs found!