- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : ssDNA-binding protein *(OSB) & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ehy_g17712 | |
| Cluster | HCCA: Cluster_54 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00042600 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g33680... | 0.02 | OrthoFinder output from all 47 species | |
| AT4G19191 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g003740 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g005766 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g033331 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g034749 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g054256 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g060857 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g067784 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g087553 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g100823 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g20304 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g32785 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g17031 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g36514 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g05087 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g05718 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g05747 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06724 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g06767 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06911 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g07213 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g19219 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g19869 | LPA66 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26399 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g30828 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g55228 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g06520 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g16102 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g26948 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27006 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27830 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27916 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g28240 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g28685 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g30453 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g36885 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g03536 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g20434 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g23792 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g28525 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene27883.t1 | Aspi01Gene27883 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene72589.t1 | MEF22, Aspi01Gene72589 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000844 | No alias | not classified & original description: CDS=1-1557 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0028.g023864 | No alias | not classified & original description: CDS=1-2211 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0037.g026000 | No alias | not classified & original description: CDS=1-2334 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0045.g030112 | No alias | not classified & original description: CDS=94-318 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0125.g048584 | CRR22 | not classified & original description: CDS=1-1611 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0221.g058730 | No alias | not classified & original description: CDS=1-747 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0349.g066523 | EMB2758 | not classified & original description: CDS=141-2294 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0503.g073910 | No alias | not classified & original description: CDS=59-2179 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g04659 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g04696 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g05302 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g06580 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g13627 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g19888 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g34432 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g38005 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g42618 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g45906 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.02G002600.1 | EMB2758, Ceric.02G002600 | not classified & original description: pacid=50585462... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.15G015100.1 | CRR22, Ceric.15G015100 | not classified & original description: pacid=50640379... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g10056 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g18582 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g22836 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g06287 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g14936 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g17092 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g42993 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g05349 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g26569 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g07460 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g12271 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g14560 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01033654001 | No alias | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g58330.1 | LPA66, LOC_Os02g58330 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g52475.1 | LOC_Os03g52475 | Pentatricopeptide repeat-containing protein At3g28660... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g39650.1 | LOC_Os06g39650 | Pentatricopeptide repeat-containing protein At1g31430... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g12672 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g16432 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g17588 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18040 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18574 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18932 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g24813 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g06214 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07817 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07823 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g14850 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g16104 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g23154 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g32880 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g03763 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g22641 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g23160 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g28769 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g33650 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g07548 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g15698 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g18410 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g24619 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g28135 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g12555 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g15249 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g22808 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g24821 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g26309 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g33393 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g34904 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g44362 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g02540 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g03106 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g03426 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g13538 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g19131 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g20094 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g20548 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g28397 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g47021 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g56906 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g59601 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g03120 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g03883 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g16176 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g22601 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23106 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g26686 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g30636 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06981 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g12921 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g13340 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g14586 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g17845 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g31149 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g44678 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g53718 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g57859 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g62422 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000644 | No alias | not classified & original description: CDS=1-2820 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0068.g016469 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2448 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0087.g018498 | No alias | not classified & original description: CDS=87-2291 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0198.g025546 | No alias | not classified & original description: CDS=1-3414 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g07814 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g24878 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g28767 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo75659 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc07g008890.3.1 | Solyc07g008890 | Pentatricopeptide repeat-containing protein At4g33170... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g007430.1.1 | PTAC9, OSB2,... | ssDNA-binding protein (OSB). TAC9 cofactor of... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g042400.1.1 | SLO1, Solyc12g042400 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g14545 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g22574 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g39673 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g47727 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g04725 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g05655 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g06098 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g06557 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g06592 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g06639 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g12955 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g16806 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g35293 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g35676 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g35678 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g35685 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013166_P001 | Zm00001e013166 | Pentatricopeptide repeat-containing protein At4g14820... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e021453_P001 | CRR28, Zm00001e021453 | Pentatricopeptide repeat-containing protein At5g06540... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006952 | defense response | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |