Description : transcription factor *(DOF) & original description: none
Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00080p00087770 | TMO6,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g27970 | OBP3 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g47633 | CDF3 | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene66325.t1 | OBP3, Aspi01Gene66325 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0176.g056104 | No alias | transcription factor *(DOF) & original description: CDS=1-1632 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g36947 | OBP3 | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01005057001 | TMO6 | RNA biosynthesis.transcriptional activation.C2C2... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g09720.1 | ADOF2, DOF2,... | transcription factor (DOF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g58190.1 | LOC_Os04g58190 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os07g13260.1 | OBP3, LOC_Os07g13260 | transcription factor (DOF) | 0.03 | OrthoFinder output from all 47 species | |
Mp2g20790.1 | TMO6 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g29167 | CDF2 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g24081 | No alias | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g50151 | No alias | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006298 | mismatch repair | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0008037 | cell recognition | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0048544 | recognition of pollen | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003851 | Znf_Dof | 20 | 76 |
No external refs found! |