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  5. Adi_g099029

Adi_g099029 (LHCB3*1, LHCB3)


Aliases : LHCB3*1, LHCB3

Description : not classified & original description: none


Gene families : OG0000137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g099029
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00251360 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
AMTR_s00045p00069900 LHCB1.5, LHB1B2,... Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
AMTR_s00099p00139960 LHCB5,... Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
AMTR_s00153p00078810 LHCB3*1, LHCB3,... Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
AMTR_s00189p00032350 LHCB1.3, CAB140,... Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
AT4G10340 LHCB5 light harvesting complex of photosystem II 5 0.04 OrthoFinder output from all 47 species
AT5G54270 LHCB3*1, LHCB3 light-harvesting chlorophyll B-binding protein 3 0.03 OrthoFinder output from all 47 species
Ala_g06137 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06102 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g02738 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Aob_g02850 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04833 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Aob_g28157 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12114 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g14660 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Aop_g16137 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Aop_g16485 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.05 OrthoFinder output from all 47 species
Aop_g21318 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.07 OrthoFinder output from all 47 species
Aop_g28499 CAB3, AB180, LHCB1.2 component *(LHCb1/2/3) of LHC-II complex & original... 0.06 OrthoFinder output from all 47 species
Aop_g69021 CAB3, AB180, LHCB1.2 component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene10234.t1 LHCB5, Aspi01Gene10234 component *(LHCb5) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31128.t1 LHCB3*1, LHCB3,... component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene35945.t1 LHCB5, Aspi01Gene35945 component *(LHCb5) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013388 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0087.g042334 LHCB5 component *(LHCb5) of LHC-II complex & original... 0.05 OrthoFinder output from all 47 species
Cba_g08707 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Cba_g38988 LHCB1.3, CAB140,... component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Cba_g70411 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Ceric.04G028300.1 LHCB5, Ceric.04G028300 component *(LHCb5) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Ceric.10G083000.1 CAB3, AB180,... component *(LHCb1/2/3) of LHC-II complex & original... 0.05 OrthoFinder output from all 47 species
Ceric.12G001900.1 LHCB3*1, LHCB3,... component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.27G039300.1 LHCB1.5, LHB1B2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Ceric.32G021400.1 LHCB1.5, LHB1B2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.32G021700.1 LHCB1.3, CAB140,... component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.32G021800.1 LHCB1.3, CAB140,... component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.37G024700.1 LHCB2.3, LHCB2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Cre01.g066917 LHCB2.2, LHCB2 Photosynthesis.photophosphorylation.photosystem... 0.01 OrthoFinder output from all 47 species
Cre03.g156900 LHCB2.2, LHCB2 Photosynthesis.photophosphorylation.photosystem... 0.01 OrthoFinder output from all 47 species
Cre04.g232104 LHCB2.2, LHCB2 Photosynthesis.photophosphorylation.photosystem... 0.01 OrthoFinder output from all 47 species
Cre06.g283950 LHCB2.2, LHCB2 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Cre06.g284250 LHCB2.2, LHCB2 Photosynthesis.photophosphorylation.photosystem... 0.01 OrthoFinder output from all 47 species
Cre06.g285250 LHCB2.2, LHCB2 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Cre12.g548400 LHCB2.2, LHCB2 Photosynthesis.photophosphorylation.photosystem... 0.01 OrthoFinder output from all 47 species
Cre12.g548950 LHCB2.2, LHCB2 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Dac_g00552 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21074 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Dac_g29163 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Dac_g29165 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Dcu_g22845 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g31165 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g31946 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Dcu_g31947 LHCB1.3, CAB140,... component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Dcu_g41148 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Dde_g18807 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18848 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Ehy_g12183 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Ehy_g12327 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Ehy_g26492 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Ehy_g29296 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030053001 LHCB2.3, LHCB2, LHCB2.4 Chlorophyll a-b binding protein 151, chloroplastic... 0.04 OrthoFinder output from all 47 species
LOC_Os07g37550.1 LHCB3*1, LHCB3,... component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species
LOC_Os09g17740.1 LHCB1.5, LHB1B2,... component LHCb1/2/3 of LHC-II complex 0.05 OrthoFinder output from all 47 species
Len_g17713 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Len_g23886 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Len_g23888 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Len_g56584 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
MA_10431300g0020 LHCB2.2, LHCB2 component LHCb1/2/3 of LHC-II complex 0.03 OrthoFinder output from all 47 species
MA_131587g0010 LHCB1.4, LHB1B1 component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species
MA_176279g0010 LHCB5 component LHCb5 of LHC-II complex 0.02 OrthoFinder output from all 47 species
MA_97315g0010 LHCB1.5, LHB1B2 component LHCb1/2/3 of LHC-II complex 0.03 OrthoFinder output from all 47 species
Mp1g29620.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.03 OrthoFinder output from all 47 species
Mp2g13460.1 LHCB2.2, LHCB2 component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species
Mp4g10900.1 LHCB5 component LHCb5 of LHC-II complex 0.04 OrthoFinder output from all 47 species
Mp7g05880.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.03 OrthoFinder output from all 47 species
Mp7g06750.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species
Mp7g06760.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.03 OrthoFinder output from all 47 species
Mp7g06770.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species
Mp7g06780.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.03 OrthoFinder output from all 47 species
Mp7g08940.1 LHCB3*1, LHCB3 component LHCb1/2/3 of LHC-II complex 0.03 OrthoFinder output from all 47 species
Mp7g09180.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.03 OrthoFinder output from all 47 species
Msp_g05193 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g07998 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Msp_g07999 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Msp_g08155 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Msp_g11796 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g22761 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.06 OrthoFinder output from all 47 species
Msp_g25099 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Msp_g26835 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Msp_g28747 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Msp_g29799 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Msp_g29800 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Msp_g30962 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Msp_g48203 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Nbi_g05167 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Nbi_g15665 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Pir_g12400 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Pir_g19912 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g52168 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Pnu_g07592 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.06 OrthoFinder output from all 47 species
Pnu_g10162 CAB3, AB180, LHCB1.2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Pnu_g10243 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g19122 CAB3, AB180, LHCB1.2 component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Ppi_g30637 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003924 LHCB5 component *(LHCb5) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Solyc02g070970.1.1 LHCB1.3, CAB140,... component LHCb1/2/3 of LHC-II complex 0.04 OrthoFinder output from all 47 species
Solyc03g005780.3.1 LHCB1.3, CAB140,... component LHCb1/2/3 of LHC-II complex 0.03 OrthoFinder output from all 47 species
Solyc06g063370.3.1 LHCB5, Solyc06g063370 component LHCb5 of LHC-II complex 0.04 OrthoFinder output from all 47 species
Solyc07g047850.3.1 LHCB2.3, LHCB2,... component LHCb1/2/3 of LHC-II complex 0.03 OrthoFinder output from all 47 species
Solyc07g063600.3.1 LHCB3*1, LHCB3,... component LHCb1/2/3 of LHC-II complex 0.03 OrthoFinder output from all 47 species
Solyc12g006140.2.1 LHCB2.2, LHCB2,... component LHCb1/2/3 of LHC-II complex 0.04 OrthoFinder output from all 47 species
Solyc12g011450.2.1 LHCB3*1, LHCB3,... component LHCb1/2/3 of LHC-II complex 0.03 OrthoFinder output from all 47 species
Spa_g04947 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29043 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g29645 LHCB3*1, LHCB3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56297 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Tin_g04406 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Tin_g08938 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12536 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Tin_g32122 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Tin_g41925 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Zm00001e004940_P001 LHCB2.3, LHCB2,... component LHCb1/2/3 of LHC-II complex 0.04 OrthoFinder output from all 47 species
Zm00001e004941_P001 LHCB2.3, LHCB2,... component LHCb1/2/3 of LHC-II complex 0.04 OrthoFinder output from all 47 species
Zm00001e011045_P002 LHCB5, Zm00001e011045 component LHCb5 of LHC-II complex 0.03 OrthoFinder output from all 47 species
Zm00001e021290_P001 LHCB5, Zm00001e021290 component LHCb5 of LHC-II complex 0.04 OrthoFinder output from all 47 species
Zm00001e032450_P001 LHCB1.5, LHB1B2,... Chlorophyll a-b binding protein, chloroplastic OS=Zea... 0.03 OrthoFinder output from all 47 species
Zm00001e034922_P001 LHCB1.5, LHB1B2,... Chlorophyll a-b binding protein 1, chloroplastic OS=Zea... 0.03 OrthoFinder output from all 47 species
Zm00001e035249_P001 LHCB3*1, LHCB3,... component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004109 coproporphyrinogen oxidase activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 23 74
No external refs found!