GSVIVT01006481001


Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING Encodes a U-box/ARM repeat protein required fore self-incompatibility. plant U-box 8 (PUB8)


Gene families : OG_01_0000079 (Gene family) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01006481001
Cluster HCCA cluster: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AT2G35930 PUB23 plant U-box 23 0.04 Gene family
AT3G52450 PUB22 plant U-box 22 0.02 Gene family
AT5G64660 CMPG2, ATCMPG2 CYS, MET, PRO, and GLY protein 2 0.03 Gene family
LOC_Os04g34030 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.03 Gene family
MA_10432179g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
MA_9494855g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 plant... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan
BP GO:0016567 protein ubiquitination IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003613 Ubox_domain 87 155
No external refs found!