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Description : RNA polymerase-IV-positioning factor *(SHH) & original description: none
Gene families : OG0001794 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001794_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ehy_g17571 | |
| Cluster | HCCA: Cluster_32 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ala_g06165 | No alias | RNA polymerase-IV-positioning factor *(SHH) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g01386 | No alias | RNA polymerase-IV-positioning factor *(SHH) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g02587 | No alias | RNA polymerase-IV-positioning factor *(SHH) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_33346 | No alias | RNA polymerase-IV-positioning factor (SHH).... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g00441 | No alias | RNA polymerase-IV-positioning factor *(SHH) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g02986 | No alias | RNA polymerase-IV-positioning factor *(SHH) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g46646 | No alias | RNA polymerase-IV-positioning factor *(SHH) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Smo405582 | No alias | RNA biosynthesis.transcriptional activation.HB... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g01284 | No alias | RNA polymerase-IV-positioning factor *(SHH) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g11155 | No alias | RNA polymerase-IV-positioning factor *(SHH) & original... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003682 | chromatin binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR032001 | SAWADEE_dom | 113 | 240 |
| No external refs found! |