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  5. AMTR_s00176p00039530

AMTR_s00176p00039530 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00176.15

Description : RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana


Gene families : OG_01_0000823 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000823_tree ,
OG_02_0002293 (LandPlants) Phylogenetic Tree(s): OG_02_0002293_tree ,
OG_03_0004327 (SeedPlants) Phylogenetic Tree(s): OG_03_0004327_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00176p00039530
Cluster HCCA: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01011643001 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01011643001 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana 0.04 LandPlants
Gb_17278 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.02 LandPlants
Gb_28433 No alias ssRNA polymerase (RDR2) 0.02 LandPlants
GSVIVT01011643001 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana 0.04 SeedPlants
GSVIVT01011645001 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007855 RNA-dep_RNA_pol_euk-typ 449 1022
No external refs found!