Adi_g095329


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g095329
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Adi_g025472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106095 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g10098 PHL1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene00238.t1 Aspi01Gene00238 transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21948.t1 Aspi01Gene21948 transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48429.t1 Aspi01Gene48429 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g43219 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05684 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g26187 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Gb_17469 KAN, KAN1 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os04g47890.1 LOC_Os04g47890 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os05g40960.1 LOC_Os05g40960 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os06g35140.1 LOC_Os06g35140 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Len_g22909 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Len_g59713 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g05530 PHL1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_335624g0020 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Mp3g04970.1 KAN, KAN1 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Mp4g01560.1 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Ore_g17650 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g66199 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014434 No alias not classified & original description: CDS=36-716 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017585 No alias not classified & original description: CDS=1499-2212 0.02 OrthoFinder output from all 47 species
Smo438638 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Tin_g14987 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Zm00001e011962_P002 KAN2, Zm00001e011962 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e037761_P001 Zm00001e037761 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030151 molybdenum ion binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 148 193
IPR001005 SANT/Myb 52 102
No external refs found!