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  5. AMTR_s00175p00055870

AMTR_s00175p00055870 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00175.27

Description : Chromatin organisation.chromatin remodeling complexes.RVB helicase component


Gene families : OG_01_0005047 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005047_tree ,
OG_02_0006020 (LandPlants) Phylogenetic Tree(s): OG_02_0006020_tree ,
OG_03_0006774 (SeedPlants) Phylogenetic Tree(s): OG_03_0006774_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00175p00055870
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
Cre09.g414050 No alias Chromatin organisation.chromatin remodeling... 0.05 Archaeplastida
Gb_29420 No alias helicase component RVB of chromatin remodeling complex 0.03 Archaeplastida
LOC_Os01g62040.1 No alias helicase component RVB of chromatin remodeling complex 0.02 Archaeplastida
LOC_Os07g08170.1 No alias helicase component RVB of chromatin remodeling complex 0.03 Archaeplastida
MA_10432659g0010 No alias helicase component RVB of chromatin remodeling complex 0.05 Archaeplastida
Solyc06g062350.4.1 No alias helicase component RVB of chromatin remodeling complex 0.03 Archaeplastida
Zm00001e013544_P001 No alias helicase component RVB of chromatin remodeling complex 0.04 Archaeplastida
Gb_29420 No alias helicase component RVB of chromatin remodeling complex 0.03 LandPlants
LOC_Os01g62040.1 No alias helicase component RVB of chromatin remodeling complex 0.02 LandPlants
LOC_Os07g08170.1 No alias helicase component RVB of chromatin remodeling complex 0.03 LandPlants
MA_10432659g0010 No alias helicase component RVB of chromatin remodeling complex 0.04 LandPlants
Solyc06g062350.4.1 No alias helicase component RVB of chromatin remodeling complex 0.03 LandPlants
Zm00001e013544_P001 No alias helicase component RVB of chromatin remodeling complex 0.04 LandPlants
Gb_29420 No alias helicase component RVB of chromatin remodeling complex 0.03 SeedPlants
LOC_Os01g62040.1 No alias helicase component RVB of chromatin remodeling complex 0.02 SeedPlants
LOC_Os07g08170.1 No alias helicase component RVB of chromatin remodeling complex 0.03 SeedPlants
MA_10432659g0010 No alias helicase component RVB of chromatin remodeling complex 0.04 SeedPlants
Solyc06g062350.4.1 No alias helicase component RVB of chromatin remodeling complex 0.03 SeedPlants
Zm00001e013544_P001 No alias helicase component RVB of chromatin remodeling complex 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010339 TIP49_P-loop 14 414
No external refs found!