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  5. MA_1171557g0010

MA_1171557g0010


Description : ubiquitin E3 ligase (CERBERUS/LIN)


Gene families : OG_01_0001418 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001418_tree ,
OG_02_0001365 (LandPlants) Phylogenetic Tree(s): OG_02_0001365_tree ,
OG_03_0003337 (SeedPlants) Phylogenetic Tree(s): OG_03_0003337_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_1171557g0010
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Gb_19331 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.03 Archaeplastida
LOC_Os01g12930.1 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.04 Archaeplastida
LOC_Os02g07190.1 No alias Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus... 0.03 Archaeplastida
LOC_Os05g30010.1 No alias Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus... 0.04 Archaeplastida
MA_7506947g0010 No alias Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus... 0.02 Archaeplastida
Solyc07g020870.3.1 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.05 Archaeplastida
Zm00001e016398_P001 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.05 Archaeplastida
GSVIVT01009918001 No alias External stimuli response.biotic... 0.02 LandPlants
Gb_19331 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.01 LandPlants
LOC_Os01g12930.1 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.04 LandPlants
MA_7506947g0010 No alias Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus... 0.02 LandPlants
Solyc07g020870.3.1 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.04 LandPlants
Zm00001e016398_P001 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.04 LandPlants
LOC_Os01g12930.1 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.01 SeedPlants
MA_7506947g0010 No alias Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus... 0.01 SeedPlants
Solyc07g020870.3.1 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.01 SeedPlants
Zm00001e016398_P001 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 268 293
IPR001680 WD40_repeat 302 336
No external refs found!