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  5. Ehy_g17020

Ehy_g17020 (ATU2AF65A)


Aliases : ATU2AF65A

Description : large subunit of U2AF pre-RNA splicing auxiliary factor complex & original description: none


Gene families : OG0000716 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000716_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Ehy_g17020

Target Alias Description ECC score Gene Family Method Actions
Adi_g117015 ATU2AF65A large subunit of U2AF pre-RNA splicing auxiliary factor... 0.03 OrthoFinder output from all 47 species
Aspi01Gene49467.t2 Aspi01Gene49467 large subunit of U2AF pre-RNA splicing auxiliary factor... 0.03 OrthoFinder output from all 47 species
Cba_g21572 No alias large subunit of U2AF pre-RNA splicing auxiliary factor... 0.03 OrthoFinder output from all 47 species
Cba_g38521 No alias large subunit of U2AF pre-RNA splicing auxiliary factor... 0.03 OrthoFinder output from all 47 species
Cre16.g695450 No alias No description available 0.02 OrthoFinder output from all 47 species
Len_g23866 No alias large subunit of U2AF pre-RNA splicing auxiliary factor... 0.02 OrthoFinder output from all 47 species
Lfl_g04836 ATU2AF65A large subunit of U2AF pre-RNA splicing auxiliary factor... 0.02 OrthoFinder output from all 47 species
Pnu_g32453 ATU2AF65A large subunit of U2AF pre-RNA splicing auxiliary factor... 0.03 OrthoFinder output from all 47 species
Ppi_g35948 No alias large subunit of U2AF pre-RNA splicing auxiliary factor... 0.02 OrthoFinder output from all 47 species
Sam_g40637 No alias large subunit of U2AF pre-RNA splicing auxiliary factor... 0.02 OrthoFinder output from all 47 species
Smo13030 ATU2AF65A RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder output from all 47 species
Spa_g15594 No alias large subunit of U2AF pre-RNA splicing auxiliary factor... 0.02 OrthoFinder output from all 47 species
Spa_g26890 ATU2AF65A large subunit of U2AF pre-RNA splicing auxiliary factor... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 357 426
IPR000504 RRM_dom 519 578
No external refs found!