GSVIVT01004942001


Description : 27.3.4 RNA.regulation of transcription.ARF, Auxin Response Factor family Encodes an auxin response factor. Mutants have many defects including enlarged rosette leaves, reduced fertility, later senescence, hypocotyl elongation defects, enlarged seeds and enlarged cotyledons. May not mediate auxin effects. Increase in seed size due to increased cell proliferation. auxin response factor 2 (ARF2)


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01004942001
Cluster HCCA cluster: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT2G28350 ARF10 auxin response factor 10 0.02 Gene family
AT4G23980 ARF9 auxin response factor 9 0.01 Gene family
AT5G20730 TIR5, MSG1,... Transcriptional factor B3 family protein /... 0.02 Gene family
AT5G62000 HSS, ARF1-BP, ARF2, ORE14 auxin response factor 2 0.02 Gene family
GSVIVT01020805001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
LOC_Os06g09660 Os06g0196700 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.01 Gene family
Solyc01g103050.3.1 Solyc01g103050.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Solyc07g042260.3.1 Solyc07g042260.3 No description available 0.03 Gene family
Solyc12g006340.2.1 Solyc12g006340.2 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.01 Gene family
Zm00001d011953 GRMZM2G116557 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d014013 GRMZM2G159399 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.01 Gene family
Zm00001d043431 GRMZM2G056120 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010525 Auxin_resp 242 324
IPR033389 AUX/IAA_dom 627 728
IPR003340 B3_DNA-bd 116 217
No external refs found!