GSVIVT01004847001


Description : 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family Encodes a putative nuclear Cys(2)His(2)-type zinc finger protein involved in H+ and Al3+ rhizotoxicity. In mutants exposed to aluminum stress, there is no induction of AtALMT1, an malate transporter known to be involved in the mediation of aluminum toxicity. sensitive to proton rhizotoxicity 1 (STOP1)


Gene families : OG_01_0001025 (Gene family) Phylogenetic Tree(s): OG0001025_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01004847001
Cluster HCCA cluster: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
AT5G22890 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Gene family
LOC_Os08g44830 Os08g0562300 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
LOC_Os12g07280 Os12g0170400 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.04 Gene family
Smo58350 PACid_15406379 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
Solyc11g017140.2.1 Solyc11g017140.2 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 169 190
No external refs found!